Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Gm31256-201ENSMUST00000194705 506 ntBASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Nsd1-205ENSMUST00000224693 852 ntBASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tlr3Q99MB1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm25890-201ENSMUST00000177643 165 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm22614-201ENSMUST00000178300 165 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm16505-201ENSMUST00000179981 232 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm9996-201ENSMUST00000070359 913 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm22042-201ENSMUST00000082989 165 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Gm26110-201ENSMUST00000083971 165 ntBASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tlr3Q99MB1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms