Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thumpd1Q99J36 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Gm11803-201ENSMUST00000119966 444 ntBASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Gm13315-201ENSMUST00000120376 991 ntBASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Gm45930-201ENSMUST00000221330 292 ntBASIC10.87□□□□□ -0.67
Thumpd1Q99J36 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thumpd1Q99J36 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm24830-201ENSMUST00000102024 166 ntBASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm12314-201ENSMUST00000118104 538 ntBASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm26232-201ENSMUST00000083360 166 ntBASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms