Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Clip1Q922J3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clip1Q922J3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Clip1Q922J3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Clip1Q922J3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC19.01■□□□□ 0.63
Clip1Q922J3 Gm5778-201ENSMUST00000171003 1072 ntBASIC19.01■□□□□ 0.63
Clip1Q922J3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Clip1Q922J3 Gm23045-201ENSMUST00000175041 96 ntBASIC19.01■□□□□ 0.63
Clip1Q922J3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Gm43830-201ENSMUST00000198760 1067 ntBASIC19.01■□□□□ 0.63
Clip1Q922J3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Gm18636-201ENSMUST00000218846 1066 ntBASIC19.01■□□□□ 0.63
Clip1Q922J3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Clip1Q922J3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Gm7537-201ENSMUST00000221660 1414 ntBASIC19.01■□□□□ 0.63
Clip1Q922J3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clip1Q922J3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Gm26616-202ENSMUST00000195676 3107 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC19■□□□□ 0.63
Clip1Q922J3 Gm8194-201ENSMUST00000159783 859 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Gm23771-201ENSMUST00000178702 110 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Gm21092-201ENSMUST00000178995 955 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC19■□□□□ 0.63
Clip1Q922J3 Gm29499-201ENSMUST00000189151 486 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Gm28329-201ENSMUST00000191208 689 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Gm29171-201ENSMUST00000191397 486 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Gm2517-201ENSMUST00000215651 348 ntBASIC19■□□□□ 0.63
Clip1Q922J3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC19■□□□□ 0.63
Clip1Q922J3 AC166344.1-201ENSMUST00000223745 674 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC19■□□□□ 0.63
Clip1Q922J3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Clip1Q922J3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Clip1Q922J3 Rnf17-202ENSMUST00000223627 2077 ntBASIC19■□□□□ 0.63
Clip1Q922J3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Clip1Q922J3 Gm6903-201ENSMUST00000160509 1366 ntBASIC18.99■□□□□ 0.63
Clip1Q922J3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Clip1Q922J3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Gm14193-201ENSMUST00000105067 153 ntBASIC18.99■□□□□ 0.63
Clip1Q922J3 Gm11949-201ENSMUST00000117640 372 ntBASIC18.99■□□□□ 0.63
Clip1Q922J3 Gm16166-201ENSMUST00000118291 787 ntBASIC18.99■□□□□ 0.63
Clip1Q922J3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC18.99■□□□□ 0.63
Clip1Q922J3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Gm43520-201ENSMUST00000197996 164 ntBASIC18.99■□□□□ 0.63
Clip1Q922J3 Gm43186-201ENSMUST00000198130 824 ntBASIC18.99■□□□□ 0.63
Clip1Q922J3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC18.99■□□□□ 0.63
Clip1Q922J3 AC113082.1-201ENSMUST00000217324 327 ntBASIC18.99■□□□□ 0.63
Clip1Q922J3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Clip1Q922J3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clip1Q922J3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip1Q922J3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC18.98■□□□□ 0.63
Clip1Q922J3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clip1Q922J3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clip1Q922J3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC18.98■□□□□ 0.63
Clip1Q922J3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms