Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm24548-201ENSMUST00000158650 108 ntBASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm45925-201ENSMUST00000218882 744 ntBASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm22058-201ENSMUST00000083393 310 ntBASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Daam2-202ENSMUST00000224595 1926 ntBASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Gm24231-201ENSMUST00000104315 133 ntBASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Gm11964-201ENSMUST00000120982 444 ntBASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga3Q91XY5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm8018-201ENSMUST00000173536 789 ntBASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms