Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gm15004-201ENSMUST00000119192 630 ntBASIC13.96□□□□□ -0.17
Trex1Q91XB0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gm15595-201ENSMUST00000120840 961 ntBASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gm12208-201ENSMUST00000122004 163 ntBASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gm14665-201ENSMUST00000122294 557 ntBASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gm45575-201ENSMUST00000210283 548 ntBASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trex1Q91XB0 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.96□□□□□ -0.17
Trex1Q91XB0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.96□□□□□ -0.17
Trex1Q91XB0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trex1Q91XB0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trex1Q91XB0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.96□□□□□ -0.18
Trex1Q91XB0 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.96□□□□□ -0.18
Trex1Q91XB0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.96□□□□□ -0.18
Trex1Q91XB0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trex1Q91XB0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trex1Q91XB0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.96□□□□□ -0.18
Trex1Q91XB0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trex1Q91XB0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trex1Q91XB0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.96□□□□□ -0.18
Trex1Q91XB0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Trex1Q91XB0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Gm15881-201ENSMUST00000148792 942 ntBASIC13.95□□□□□ -0.18
Trex1Q91XB0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Trex1Q91XB0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trex1Q91XB0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.94□□□□□ -0.18
Trex1Q91XB0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Gm27438-201ENSMUST00000183480 110 ntBASIC13.94□□□□□ -0.18
Trex1Q91XB0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trex1Q91XB0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trex1Q91XB0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms