Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm25261-201ENSMUST00000157416 134 ntBASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm19791-201ENSMUST00000180398 859 ntBASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm8513-201ENSMUST00000182830 1003 ntBASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm37708-201ENSMUST00000192337 895 ntBASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb17Q91VD8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm23363-201ENSMUST00000175024 79 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm5370-201ENSMUST00000187187 574 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Olfr1055-202ENSMUST00000188023 939 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm19066-201ENSMUST00000193232 1078 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm8703-201ENSMUST00000203793 730 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Mir339-201ENSMUST00000083659 96 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Gm9742-202ENSMUST00000222219 1396 ntBASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb17Q91VD8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb17Q91VD8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb17Q91VD8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb17Q91VD8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb17Q91VD8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms