Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm12859-201ENSMUST00000117834 427 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm13492-201ENSMUST00000119772 665 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm12036-201ENSMUST00000120008 530 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nup35Q8R4R6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.93□□□□□ -0.82
Nup35Q8R4R6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.93□□□□□ -0.82
Nup35Q8R4R6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Gm13315-201ENSMUST00000120376 991 ntBASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.93□□□□□ -0.82
Nup35Q8R4R6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Gm28911-201ENSMUST00000188837 117 ntBASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Gm45668-201ENSMUST00000211271 493 ntBASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nup35Q8R4R6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms