Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Gm35960-201ENSMUST00000202712 767 ntBASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Gm4157-201ENSMUST00000211647 679 ntBASIC14.21□□□□□ -0.13
Alx1Q8C8B0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alx1Q8C8B0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alx1Q8C8B0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alx1Q8C8B0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Alx1Q8C8B0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alx1Q8C8B0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alx1Q8C8B0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Gm11509-201ENSMUST00000117358 325 ntBASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Gm7857-201ENSMUST00000117957 358 ntBASIC14.2□□□□□ -0.14
Alx1Q8C8B0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Gm27552-201ENSMUST00000183351 62 ntBASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Gm27844-201ENSMUST00000183613 62 ntBASIC14.2□□□□□ -0.14
Alx1Q8C8B0 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Alx1Q8C8B0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Gm17040-202ENSMUST00000170597 889 ntBASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Gm16505-201ENSMUST00000179981 232 ntBASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Mir7677-201ENSMUST00000184226 67 ntBASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms