Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Mir8109-201ENSMUST00000184375 117 ntBASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.59□□□□□ -0.39
Trub1Q8C0D0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trub1Q8C0D0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Gm23270-201ENSMUST00000104055 131 ntBASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trub1Q8C0D0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm15547-201ENSMUST00000122152 333 ntBASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm21769-201ENSMUST00000211922 111 ntBASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.57□□□□□ -0.4
Trub1Q8C0D0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms