Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm13875-201ENSMUST00000120162 282 ntBASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm15703-201ENSMUST00000120250 880 ntBASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm13350-201ENSMUST00000120519 479 ntBASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm3961-201ENSMUST00000204425 994 ntBASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm7783-201ENSMUST00000204795 781 ntBASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm5904-201ENSMUST00000210286 865 ntBASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpsf4Q8BQZ5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Gm24231-201ENSMUST00000104315 133 ntBASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Cpsf4Q8BQZ5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cpsf4Q8BQZ5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms