Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Gm18893-201ENSMUST00000198416 943 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Gm17812-201ENSMUST00000204935 318 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Gm4607-201ENSMUST00000206649 577 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm11511-201ENSMUST00000118146 540 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm5616-201ENSMUST00000165252 384 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm8741-201ENSMUST00000174736 384 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm44262-201ENSMUST00000204969 372 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Map1b-203ENSMUST00000223725 2669 ntBASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atg4dQ8BGV9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Gm37666-201ENSMUST00000194110 866 ntBASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Gm45186-201ENSMUST00000206874 478 ntBASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Gm17931-201ENSMUST00000208132 634 ntBASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atg4dQ8BGV9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms