Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm8194-201ENSMUST00000159783 859 ntBASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Gm15573-201ENSMUST00000119487 540 ntBASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Gm7600-201ENSMUST00000209657 785 ntBASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Usp6nlQ80XC3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gm15595-201ENSMUST00000120840 961 ntBASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gm17831-201ENSMUST00000205579 900 ntBASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gm9463-201ENSMUST00000206707 601 ntBASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gm9797-202ENSMUST00000218003 294 ntBASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gm18041-201ENSMUST00000218210 618 ntBASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Usp6nlQ80XC3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms