Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ush1gQ80T11 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ush1gQ80T11 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ush1gQ80T11 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ush1gQ80T11 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.39□□□□□ -0.27
Ush1gQ80T11 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.39□□□□□ -0.27
Ush1gQ80T11 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ush1gQ80T11 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ush1gQ80T11 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.38□□□□□ -0.27
Ush1gQ80T11 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.38□□□□□ -0.27
Ush1gQ80T11 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Gm18038-201ENSMUST00000197900 485 ntBASIC13.38□□□□□ -0.27
Ush1gQ80T11 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Gm10179-201ENSMUST00000086233 688 ntBASIC13.38□□□□□ -0.27
Ush1gQ80T11 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.38□□□□□ -0.27
Ush1gQ80T11 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ush1gQ80T11 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm14058-201ENSMUST00000116082 735 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm13035-201ENSMUST00000117496 342 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm9555-201ENSMUST00000200908 583 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm44126-201ENSMUST00000204831 514 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm45219-201ENSMUST00000205602 465 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.37□□□□□ -0.27
Ush1gQ80T11 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.37□□□□□ -0.27
Ush1gQ80T11 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ush1gQ80T11 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ush1gQ80T11 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ush1gQ80T11 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ush1gQ80T11 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ush1gQ80T11 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ush1gQ80T11 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ush1gQ80T11 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ush1gQ80T11 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ush1gQ80T11 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ush1gQ80T11 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms