Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ctdp1Q7TSG2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ctdp1Q7TSG2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Ctdp1Q7TSG2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ctdp1Q7TSG2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ctdp1Q7TSG2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ctdp1Q7TSG2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Gm16296-201ENSMUST00000159905 325 ntBASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Gm40466-201ENSMUST00000212174 422 ntBASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ctdp1Q7TSG2 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Gm16177-201ENSMUST00000120728 718 ntBASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Gm26185-201ENSMUST00000157692 266 ntBASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ctdp1Q7TSG2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Snord83b-201ENSMUST00000104546 94 ntBASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Gm12742-201ENSMUST00000117326 410 ntBASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Gm37042-201ENSMUST00000193816 581 ntBASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdp1Q7TSG2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms