Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Gm18734-201ENSMUST00000172937 808 ntBASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gm7722-201ENSMUST00000120646 741 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 B9d1os-201ENSMUST00000137010 674 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Mir6979-201ENSMUST00000183927 56 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gm4034-201ENSMUST00000187674 480 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gm43184-201ENSMUST00000197247 542 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gm43378-201ENSMUST00000199336 582 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubfd1Q78JW9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubfd1Q78JW9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms