Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm11597-201ENSMUST00000121423 964 ntBASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm8018-201ENSMUST00000173536 789 ntBASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm5035-201ENSMUST00000215581 927 ntBASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smarcd3Q6P9Z1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smarcd3Q6P9Z1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms