Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.49□□□□□ -0.25
Krt39Q6IFX4 AY702102-202ENSMUST00000194651 1173 ntBASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Gm18584-201ENSMUST00000203098 964 ntBASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Gm45925-201ENSMUST00000218882 744 ntBASIC13.49□□□□□ -0.25
Krt39Q6IFX4 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Gm45930-201ENSMUST00000221330 292 ntBASIC13.49□□□□□ -0.25
Krt39Q6IFX4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Gm44958-201ENSMUST00000203734 736 ntBASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Gm5904-201ENSMUST00000210286 865 ntBASIC13.48□□□□□ -0.25
Krt39Q6IFX4 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.48□□□□□ -0.25
Krt39Q6IFX4 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Krt39Q6IFX4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm13342-201ENSMUST00000121055 207 ntBASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm7809-201ENSMUST00000153199 742 ntBASIC13.47□□□□□ -0.25
Krt39Q6IFX4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.47□□□□□ -0.25
Krt39Q6IFX4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.47□□□□□ -0.25
Krt39Q6IFX4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms