Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.22□□□□□ -0.61
Cd47Q61735 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cd47Q61735 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cd47Q61735 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cd47Q61735 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.22□□□□□ -0.61
Cd47Q61735 Gm1335-201ENSMUST00000121653 386 ntBASIC11.22□□□□□ -0.61
Cd47Q61735 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cd47Q61735 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cd47Q61735 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.22□□□□□ -0.61
Cd47Q61735 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.22□□□□□ -0.61
Cd47Q61735 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.22□□□□□ -0.61
Cd47Q61735 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cd47Q61735 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cd47Q61735 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cd47Q61735 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cd47Q61735 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cd47Q61735 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd47Q61735 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.21□□□□□ -0.61
Cd47Q61735 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.21□□□□□ -0.61
Cd47Q61735 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd47Q61735 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd47Q61735 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.21□□□□□ -0.61
Cd47Q61735 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.21□□□□□ -0.61
Cd47Q61735 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.21□□□□□ -0.61
Cd47Q61735 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.21□□□□□ -0.61
Cd47Q61735 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd47Q61735 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cd47Q61735 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.21□□□□□ -0.61
Cd47Q61735 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd47Q61735 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC11.21□□□□□ -0.61
Cd47Q61735 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd47Q61735 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Cd47Q61735 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cd47Q61735 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd47Q61735 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd47Q61735 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.21□□□□□ -0.62
Cd47Q61735 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd47Q61735 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd47Q61735 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cd47Q61735 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd47Q61735 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.21□□□□□ -0.62
Cd47Q61735 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.21□□□□□ -0.62
Cd47Q61735 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cd47Q61735 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cd47Q61735 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd47Q61735 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cd47Q61735 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd47Q61735 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd47Q61735 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd47Q61735 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd47Q61735 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd47Q61735 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd47Q61735 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd47Q61735 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.2□□□□□ -0.62
Cd47Q61735 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms