Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Gm27039-201ENSMUST00000182438 962 ntBASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.98□□□□□ -0.33
Foxd4Q60688 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.98□□□□□ -0.33
Foxd4Q60688 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm44397-201ENSMUST00000195950 113 ntBASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm42964-201ENSMUST00000202965 382 ntBASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC12.98□□□□□ -0.33
Foxd4Q60688 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC12.98□□□□□ -0.33
Foxd4Q60688 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.98□□□□□ -0.33
Foxd4Q60688 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.98□□□□□ -0.33
Foxd4Q60688 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Foxd4Q60688 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.98□□□□□ -0.33
Foxd4Q60688 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxd4Q60688 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Foxd4Q60688 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm42462-201ENSMUST00000196543 1363 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm43341-201ENSMUST00000200104 1308 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm14908-201ENSMUST00000120930 1286 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.97□□□□□ -0.33
Foxd4Q60688 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm37866-201ENSMUST00000191950 696 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm37082-201ENSMUST00000192629 1927 ntBASIC12.97□□□□□ -0.33
Foxd4Q60688 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxd4Q60688 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxd4Q60688 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxd4Q60688 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxd4Q60688 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.96□□□□□ -0.33
Foxd4Q60688 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.96□□□□□ -0.33
Foxd4Q60688 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Foxd4Q60688 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxd4Q60688 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Foxd4Q60688 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Foxd4Q60688 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxd4Q60688 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxd4Q60688 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Foxd4Q60688 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.96□□□□□ -0.33
Foxd4Q60688 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxd4Q60688 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms