Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm27331-201ENSMUST00000183705 60 ntBASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm12928-201ENSMUST00000117115 573 ntBASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm8213-201ENSMUST00000118191 441 ntBASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm9022-201ENSMUST00000182482 992 ntBASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Gm27243-201ENSMUST00000183964 521 ntBASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav15-1-dv6-1Q5R1D2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 154.3 ms