Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trpm3Q5F4S9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm3Q5F4S9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm3Q5F4S9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm3Q5F4S9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC15.21■□□□□ 0.02
Trpm3Q5F4S9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm3Q5F4S9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trpm3Q5F4S9 Gm23272-201ENSMUST00000104053 129 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm13047-201ENSMUST00000117116 815 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm7150-201ENSMUST00000122032 981 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm45120-201ENSMUST00000208880 408 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm8342-201ENSMUST00000209839 757 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm43242-201ENSMUST00000199507 1776 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm11956-201ENSMUST00000119525 512 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Gm20392-201ENSMUST00000173047 701 ntBASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpm3Q5F4S9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Gm11949-201ENSMUST00000117640 372 ntBASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Gm3793-201ENSMUST00000204973 672 ntBASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpm3Q5F4S9 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.18■□□□□ 0.02
Trpm3Q5F4S9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm3Q5F4S9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm3Q5F4S9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm3Q5F4S9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trpm3Q5F4S9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trpm3Q5F4S9 Gm13937-201ENSMUST00000121000 988 ntBASIC15.18■□□□□ 0.02
Trpm3Q5F4S9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpm3Q5F4S9 Gm8737-201ENSMUST00000122208 642 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms