Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Gm8062-201ENSMUST00000139696 444 ntBASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Gm25043-201ENSMUST00000158604 212 ntBASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Gm38158-201ENSMUST00000194617 339 ntBASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Gm42693-201ENSMUST00000196779 631 ntBASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.5□□□□□ -0.57
Brf2Q3UAW9 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Brf2Q3UAW9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm23912-201ENSMUST00000104687 87 ntBASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm12957-201ENSMUST00000117835 377 ntBASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm4986-201ENSMUST00000119731 549 ntBASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm11793-201ENSMUST00000120433 981 ntBASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm28882-201ENSMUST00000185504 314 ntBASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 AY702102-202ENSMUST00000194651 1173 ntBASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 210.9 ms