Protein–RNA interactions for Protein: Q2NKI2

Vax1, Ventral anterior homeobox 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vax1Q2NKI2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vax1Q2NKI2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Mir7677-201ENSMUST00000184226 67 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Gm5733-201ENSMUST00000190232 939 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Gm19931-201ENSMUST00000198920 368 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Gm4482-201ENSMUST00000200876 742 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Gm17827-201ENSMUST00000211825 742 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Mir339-201ENSMUST00000083659 96 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vax1Q2NKI2 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Gm22133-201ENSMUST00000102082 109 ntBASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Gm13315-201ENSMUST00000120376 991 ntBASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Gm12291-201ENSMUST00000121627 311 ntBASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Gm2517-201ENSMUST00000215651 348 ntBASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vax1Q2NKI2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms