Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Gm15711-201ENSMUST00000118889 535 ntBASIC12.41□□□□□ -0.42
Ebf1Q07802 Gm15131-201ENSMUST00000119124 595 ntBASIC12.41□□□□□ -0.42
Ebf1Q07802 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.41□□□□□ -0.42
Ebf1Q07802 Gm42937-201ENSMUST00000197360 752 ntBASIC12.41□□□□□ -0.42
Ebf1Q07802 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Ebf1Q07802 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.41□□□□□ -0.42
Ebf1Q07802 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.41□□□□□ -0.42
Ebf1Q07802 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf1Q07802 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ebf1Q07802 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.4□□□□□ -0.42
Ebf1Q07802 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ebf1Q07802 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.4□□□□□ -0.42
Ebf1Q07802 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.4□□□□□ -0.42
Ebf1Q07802 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Ebf1Q07802 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf1Q07802 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.4□□□□□ -0.42
Ebf1Q07802 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ebf1Q07802 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ebf1Q07802 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ebf1Q07802 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Ebf1Q07802 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.4□□□□□ -0.43
Ebf1Q07802 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Gm13045-201ENSMUST00000119019 712 ntBASIC12.39□□□□□ -0.43
Ebf1Q07802 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ebf1Q07802 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.39□□□□□ -0.43
Ebf1Q07802 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.39□□□□□ -0.43
Ebf1Q07802 Ntng1-201ENSMUST00000051253 327 ntBASIC12.39□□□□□ -0.43
Ebf1Q07802 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms