Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Col9a1Q05722 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a1Q05722 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.28□□□□□ -0.44
Col9a1Q05722 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a1Q05722 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a1Q05722 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a1Q05722 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Col9a1Q05722 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col9a1Q05722 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a1Q05722 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col9a1Q05722 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a1Q05722 AC130831.1-201ENSMUST00000224546 1474 ntBASIC12.27□□□□□ -0.44
Col9a1Q05722 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Col9a1Q05722 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.27□□□□□ -0.44
Col9a1Q05722 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Col9a1Q05722 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a1Q05722 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Col9a1Q05722 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col9a1Q05722 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Gm25226-201ENSMUST00000158198 123 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Gm18356-201ENSMUST00000185677 623 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC12.27□□□□□ -0.45
Col9a1Q05722 Gm21394-202ENSMUST00000189463 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Gm20806-202ENSMUST00000190349 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 Gm43184-201ENSMUST00000197247 542 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 AC161426.1-201ENSMUST00000214137 286 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.27□□□□□ -0.45
Col9a1Q05722 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC12.27□□□□□ -0.45
Col9a1Q05722 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col9a1Q05722 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 AC132384.4-201ENSMUST00000220343 1397 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.27□□□□□ -0.45
Col9a1Q05722 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Col9a1Q05722 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.27□□□□□ -0.45
Col9a1Q05722 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.27□□□□□ -0.45
Col9a1Q05722 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a1Q05722 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.27□□□□□ -0.45
Col9a1Q05722 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Col9a1Q05722 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm11996-201ENSMUST00000117538 915 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm11560-201ENSMUST00000117567 948 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm12986-201ENSMUST00000119037 967 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm8261-201ENSMUST00000119275 1208 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Defa-ps16-201ENSMUST00000121939 171 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm25971-201ENSMUST00000158953 286 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm7627-201ENSMUST00000183205 999 ntBASIC12.26□□□□□ -0.45
Col9a1Q05722 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a1Q05722 Gm3551-201ENSMUST00000190750 664 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms