Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trim43bP86448 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43bP86448 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43bP86448 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trim43bP86448 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43bP86448 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43bP86448 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trim43bP86448 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43bP86448 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43bP86448 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
Trim43bP86448 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Trim43bP86448 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Gm22018-201ENSMUST00000104357 131 ntBASIC12.58□□□□□ -0.4
Trim43bP86448 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43bP86448 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trim43bP86448 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Trim43bP86448 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim43bP86448 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim43bP86448 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43bP86448 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.58□□□□□ -0.4
Trim43bP86448 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.58□□□□□ -0.4
Trim43bP86448 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43bP86448 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim43bP86448 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.57□□□□□ -0.4
Trim43bP86448 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43bP86448 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.57□□□□□ -0.4
Trim43bP86448 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trim43bP86448 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim43bP86448 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm43118-201ENSMUST00000199149 775 ntBASIC12.57□□□□□ -0.4
Trim43bP86448 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm5781-201ENSMUST00000219792 443 ntBASIC12.57□□□□□ -0.4
Trim43bP86448 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.57□□□□□ -0.4
Trim43bP86448 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.57□□□□□ -0.4
Trim43bP86448 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.57□□□□□ -0.4
Trim43bP86448 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43bP86448 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43bP86448 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
Trim43bP86448 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.57□□□□□ -0.4
Trim43bP86448 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim43bP86448 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim43bP86448 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trim43bP86448 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43bP86448 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 176.2 ms