Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SgcbP82349 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SgcbP82349 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.94□□□□□ -0.66
SgcbP82349 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SgcbP82349 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.94□□□□□ -0.66
SgcbP82349 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SgcbP82349 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.93□□□□□ -0.66
SgcbP82349 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.93□□□□□ -0.66
SgcbP82349 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.93□□□□□ -0.66
SgcbP82349 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.93□□□□□ -0.66
SgcbP82349 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.93□□□□□ -0.66
SgcbP82349 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.93□□□□□ -0.66
SgcbP82349 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC10.93□□□□□ -0.66
SgcbP82349 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.93□□□□□ -0.66
SgcbP82349 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SgcbP82349 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.93□□□□□ -0.66
SgcbP82349 Gm44967-201ENSMUST00000207047 631 ntBASIC10.93□□□□□ -0.66
SgcbP82349 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC10.93□□□□□ -0.66
SgcbP82349 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Gzmn-202ENSMUST00000225535 989 ntBASIC10.93□□□□□ -0.66
SgcbP82349 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SgcbP82349 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.93□□□□□ -0.66
SgcbP82349 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SgcbP82349 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.93□□□□□ -0.66
SgcbP82349 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SgcbP82349 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcbP82349 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.92□□□□□ -0.66
SgcbP82349 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
SgcbP82349 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SgcbP82349 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.92□□□□□ -0.66
SgcbP82349 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.92□□□□□ -0.66
SgcbP82349 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.92□□□□□ -0.66
SgcbP82349 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
SgcbP82349 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Gm24830-201ENSMUST00000102024 166 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.92□□□□□ -0.66
SgcbP82349 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcbP82349 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.92□□□□□ -0.66
SgcbP82349 Gm25890-201ENSMUST00000177643 165 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.92□□□□□ -0.66
SgcbP82349 Gm22614-201ENSMUST00000178300 165 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms