Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.04□□□□□ -0.48
Shox2P70390 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Shox2P70390 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.04□□□□□ -0.48
Shox2P70390 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Shox2P70390 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Shox2P70390 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.04□□□□□ -0.48
Shox2P70390 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.03□□□□□ -0.48
Shox2P70390 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.03□□□□□ -0.48
Shox2P70390 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Shox2P70390 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.03□□□□□ -0.48
Shox2P70390 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Shox2P70390 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Shox2P70390 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shox2P70390 Gm9083-201ENSMUST00000120423 819 ntBASIC12.03□□□□□ -0.48
Shox2P70390 Gm13123-201ENSMUST00000122173 492 ntBASIC12.03□□□□□ -0.48
Shox2P70390 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.03□□□□□ -0.48
Shox2P70390 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shox2P70390 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.03□□□□□ -0.48
Shox2P70390 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.03□□□□□ -0.48
Shox2P70390 Gm17837-201ENSMUST00000186435 985 ntBASIC12.03□□□□□ -0.48
Shox2P70390 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.03□□□□□ -0.48
Shox2P70390 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.03□□□□□ -0.48
Shox2P70390 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shox2P70390 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.03□□□□□ -0.48
Shox2P70390 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Cog3-203ENSMUST00000227473 4197 ntBASIC12.03□□□□□ -0.48
Shox2P70390 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shox2P70390 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shox2P70390 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.02□□□□□ -0.48
Shox2P70390 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Shox2P70390 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shox2P70390 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Shox2P70390 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shox2P70390 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shox2P70390 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shox2P70390 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.02□□□□□ -0.48
Shox2P70390 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.02□□□□□ -0.49
Shox2P70390 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm11618-201ENSMUST00000117946 267 ntBASIC12.02□□□□□ -0.49
Shox2P70390 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shox2P70390 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.02□□□□□ -0.49
Shox2P70390 Gm38092-201ENSMUST00000195600 653 ntBASIC12.02□□□□□ -0.49
Shox2P70390 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.02□□□□□ -0.49
Shox2P70390 Gm18473-201ENSMUST00000220543 868 ntBASIC12.02□□□□□ -0.49
Shox2P70390 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm20445-201ENSMUST00000061905 565 ntBASIC12.02□□□□□ -0.49
Shox2P70390 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Shox2P70390 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.02□□□□□ -0.49
Shox2P70390 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.02□□□□□ -0.49
Shox2P70390 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Shox2P70390 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms