Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lhx1P63006 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx1P63006 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx1P63006 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.01□□□□□ -0.49
Lhx1P63006 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx1P63006 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lhx1P63006 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx1P63006 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.01□□□□□ -0.49
Lhx1P63006 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx1P63006 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx1P63006 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx1P63006 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx1P63006 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.01□□□□□ -0.49
Lhx1P63006 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lhx1P63006 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Lhx1P63006 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lhx1P63006 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lhx1P63006 Gm12266-201ENSMUST00000120311 962 ntBASIC12□□□□□ -0.49
Lhx1P63006 Gm7722-201ENSMUST00000120646 741 ntBASIC12□□□□□ -0.49
Lhx1P63006 Gm14247-201ENSMUST00000120950 237 ntBASIC12□□□□□ -0.49
Lhx1P63006 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12□□□□□ -0.49
Lhx1P63006 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12□□□□□ -0.49
Lhx1P63006 Gm18038-201ENSMUST00000197900 485 ntBASIC12□□□□□ -0.49
Lhx1P63006 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12□□□□□ -0.49
Lhx1P63006 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Gm17827-201ENSMUST00000211825 742 ntBASIC12□□□□□ -0.49
Lhx1P63006 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12□□□□□ -0.49
Lhx1P63006 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Olfr1347-205ENSMUST00000220413 964 ntBASIC12□□□□□ -0.49
Lhx1P63006 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Mettl6-204ENSMUST00000227595 1027 ntBASIC12□□□□□ -0.49
Lhx1P63006 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lhx1P63006 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lhx1P63006 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lhx1P63006 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx1P63006 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lhx1P63006 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx1P63006 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Lhx1P63006 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lhx1P63006 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Gm23949-201ENSMUST00000104027 127 ntBASIC11.99□□□□□ -0.49
Lhx1P63006 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.99□□□□□ -0.49
Lhx1P63006 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Gm17040-202ENSMUST00000170597 889 ntBASIC11.99□□□□□ -0.49
Lhx1P63006 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx1P63006 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Gm28450-201ENSMUST00000187349 638 ntBASIC11.99□□□□□ -0.49
Lhx1P63006 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx1P63006 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.99□□□□□ -0.49
Lhx1P63006 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lhx1P63006 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx1P63006 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx1P63006 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lhx1P63006 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.99□□□□□ -0.49
Lhx1P63006 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Lhx1P63006 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Lhx1P63006 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx1P63006 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lhx1P63006 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx1P63006 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx1P63006 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Lhx1P63006 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms