Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.09□□□□□ -0.63
Lsm3P62311 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.09□□□□□ -0.63
Lsm3P62311 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Lsm3P62311 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.09□□□□□ -0.63
Lsm3P62311 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.09□□□□□ -0.63
Lsm3P62311 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Lsm3P62311 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.09□□□□□ -0.63
Lsm3P62311 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Lsm3P62311 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Lsm3P62311 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Lsm3P62311 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.08□□□□□ -0.64
Lsm3P62311 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.08□□□□□ -0.64
Lsm3P62311 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lsm3P62311 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Lsm3P62311 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Lsm3P62311 Mir449b-201ENSMUST00000104833 80 ntBASIC11.08□□□□□ -0.64
Lsm3P62311 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.08□□□□□ -0.64
Lsm3P62311 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Lsm3P62311 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.08□□□□□ -0.64
Lsm3P62311 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.08□□□□□ -0.64
Lsm3P62311 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.08□□□□□ -0.64
Lsm3P62311 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Lsm3P62311 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lsm3P62311 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Lsm3P62311 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.08□□□□□ -0.64
Lsm3P62311 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Lsm3P62311 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm3P62311 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Lsm3P62311 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lsm3P62311 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lsm3P62311 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Lsm3P62311 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.07□□□□□ -0.64
Lsm3P62311 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.07□□□□□ -0.64
Lsm3P62311 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Lsm3P62311 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
Lsm3P62311 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.07□□□□□ -0.64
Lsm3P62311 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.07□□□□□ -0.64
Lsm3P62311 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms