Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Fdft1P53798 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Fdft1P53798 Gm23931-201ENSMUST00000103842 109 ntBASIC12.22□□□□□ -0.45
Fdft1P53798 Gm22018-201ENSMUST00000104357 131 ntBASIC12.22□□□□□ -0.45
Fdft1P53798 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.22□□□□□ -0.45
Fdft1P53798 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Fdft1P53798 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.22□□□□□ -0.45
Fdft1P53798 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.22□□□□□ -0.45
Fdft1P53798 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.22□□□□□ -0.45
Fdft1P53798 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.22□□□□□ -0.45
Fdft1P53798 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.22□□□□□ -0.45
Fdft1P53798 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.22□□□□□ -0.45
Fdft1P53798 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.22□□□□□ -0.45
Fdft1P53798 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Fdft1P53798 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.22□□□□□ -0.45
Fdft1P53798 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fdft1P53798 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Fdft1P53798 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Fdft1P53798 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Fdft1P53798 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Gm6023-201ENSMUST00000118217 606 ntBASIC12.21□□□□□ -0.45
Fdft1P53798 Gm13736-201ENSMUST00000119272 253 ntBASIC12.21□□□□□ -0.45
Fdft1P53798 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.21□□□□□ -0.45
Fdft1P53798 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Fdft1P53798 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.21□□□□□ -0.45
Fdft1P53798 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.21□□□□□ -0.45
Fdft1P53798 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.21□□□□□ -0.45
Fdft1P53798 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.21□□□□□ -0.45
Fdft1P53798 Gm18062-201ENSMUST00000208020 547 ntBASIC12.21□□□□□ -0.45
Fdft1P53798 Gm18055-201ENSMUST00000208254 547 ntBASIC12.21□□□□□ -0.45
Fdft1P53798 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.21□□□□□ -0.45
Fdft1P53798 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.21□□□□□ -0.45
Fdft1P53798 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Gm25857-201ENSMUST00000082788 129 ntBASIC12.21□□□□□ -0.45
Fdft1P53798 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Fdft1P53798 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Fdft1P53798 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Fdft1P53798 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fdft1P53798 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fdft1P53798 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Fdft1P53798 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Fdft1P53798 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.21□□□□□ -0.46
Fdft1P53798 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fdft1P53798 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.21□□□□□ -0.46
Fdft1P53798 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.21□□□□□ -0.46
Fdft1P53798 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fdft1P53798 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fdft1P53798 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.21□□□□□ -0.46
Fdft1P53798 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fdft1P53798 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fdft1P53798 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Fdft1P53798 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Fdft1P53798 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Fdft1P53798 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.2□□□□□ -0.46
Fdft1P53798 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Fdft1P53798 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.2□□□□□ -0.46
Fdft1P53798 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.2□□□□□ -0.46
Fdft1P53798 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.2□□□□□ -0.46
Fdft1P53798 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Gm27390-201ENSMUST00000184516 176 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms