Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Gm24830-201ENSMUST00000102024 166 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Ercc3P49135 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.51□□□□□ -0.09
Ercc3P49135 Gm25890-201ENSMUST00000177643 165 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Gm22614-201ENSMUST00000178300 165 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ercc3P49135 Gm38317-201ENSMUST00000195564 343 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ercc3P49135 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.51□□□□□ -0.09
Ercc3P49135 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Gm22042-201ENSMUST00000082989 165 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Gm26232-201ENSMUST00000083360 166 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Gm26110-201ENSMUST00000083971 165 ntBASIC14.51□□□□□ -0.09
Ercc3P49135 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ercc3P49135 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ercc3P49135 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.51□□□□□ -0.09
Ercc3P49135 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ercc3P49135 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ercc3P49135 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.5□□□□□ -0.09
Ercc3P49135 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.5□□□□□ -0.09
Ercc3P49135 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ercc3P49135 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Mir877-201ENSMUST00000104738 85 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 Gm18056-201ENSMUST00000207670 568 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 Gm18061-201ENSMUST00000208350 562 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 Gm18063-201ENSMUST00000208529 568 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 Gm18052-201ENSMUST00000208750 559 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ercc3P49135 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.5□□□□□ -0.09
Ercc3P49135 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ercc3P49135 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ercc3P49135 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ercc3P49135 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.5□□□□□ -0.09
Ercc3P49135 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.5□□□□□ -0.09
Ercc3P49135 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.49□□□□□ -0.09
Ercc3P49135 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ercc3P49135 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ercc3P49135 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ercc3P49135 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ercc3P49135 Gm6963-201ENSMUST00000147879 379 ntBASIC14.49□□□□□ -0.09
Ercc3P49135 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.49□□□□□ -0.09
Ercc3P49135 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.49□□□□□ -0.09
Ercc3P49135 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.49□□□□□ -0.09
Ercc3P49135 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.49□□□□□ -0.09
Ercc3P49135 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.49□□□□□ -0.09
Ercc3P49135 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.49□□□□□ -0.09
Ercc3P49135 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.49□□□□□ -0.09
Ercc3P49135 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.49□□□□□ -0.09
Ercc3P49135 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ercc3P49135 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.49□□□□□ -0.09
Ercc3P49135 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms