Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm25212-201ENSMUST00000179432 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm26391-201ENSMUST00000179843 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.6□□□□□ -0.39
HttP42859 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.6□□□□□ -0.39
HttP42859 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Gm24089-201ENSMUST00000093696 109 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HttP42859 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
HttP42859 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Gm24933-201ENSMUST00000103762 110 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm23252-201ENSMUST00000103776 110 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm15549-201ENSMUST00000121595 622 ntBASIC12.6□□□□□ -0.39
HttP42859 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.6□□□□□ -0.39
HttP42859 Gm26443-201ENSMUST00000179610 110 ntBASIC12.6□□□□□ -0.39
HttP42859 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.6□□□□□ -0.39
HttP42859 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.6□□□□□ -0.39
HttP42859 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.6□□□□□ -0.39
HttP42859 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HttP42859 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
HttP42859 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HttP42859 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
HttP42859 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HttP42859 Mir874-201ENSMUST00000104769 76 ntBASIC12.59□□□□□ -0.39
HttP42859 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.59□□□□□ -0.39
HttP42859 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.59□□□□□ -0.39
HttP42859 Gm8226-201ENSMUST00000190511 798 ntBASIC12.59□□□□□ -0.39
HttP42859 Gm30946-201ENSMUST00000198288 724 ntBASIC12.59□□□□□ -0.39
HttP42859 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.59□□□□□ -0.39
HttP42859 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.59□□□□□ -0.39
HttP42859 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.59□□□□□ -0.39
HttP42859 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HttP42859 Gm4978-201ENSMUST00000071565 801 ntBASIC12.59□□□□□ -0.39
HttP42859 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.59□□□□□ -0.39
HttP42859 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HttP42859 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.59□□□□□ -0.39
HttP42859 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC12.59□□□□□ -0.39
HttP42859 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Gm27444-201ENSMUST00000184157 137 ntBASIC12.59□□□□□ -0.39
HttP42859 Gm5190-201ENSMUST00000192434 357 ntBASIC12.59□□□□□ -0.39
HttP42859 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
HttP42859 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.59□□□□□ -0.39
HttP42859 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HttP42859 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HttP42859 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HttP42859 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Gm37365-201ENSMUST00000193109 409 ntBASIC12.58□□□□□ -0.4
HttP42859 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HttP42859 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
HttP42859 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.58□□□□□ -0.4
HttP42859 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
HttP42859 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.58□□□□□ -0.4
HttP42859 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
HttP42859 Gm7741-201ENSMUST00000181445 989 ntBASIC12.58□□□□□ -0.4
HttP42859 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HttP42859 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
HttP42859 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
HttP42859 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms