Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox6P40645 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox6P40645 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.49□□□□□ -0.57
Sox6P40645 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sox6P40645 Gm12363-201ENSMUST00000122250 668 ntBASIC11.49□□□□□ -0.57
Sox6P40645 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.49□□□□□ -0.57
Sox6P40645 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.49□□□□□ -0.57
Sox6P40645 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Gm22121-201ENSMUST00000175148 54 ntBASIC11.49□□□□□ -0.57
Sox6P40645 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sox6P40645 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Sox6P40645 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox6P40645 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox6P40645 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Sox6P40645 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox6P40645 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox6P40645 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Sox6P40645 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Gm14921-201ENSMUST00000118643 908 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Sox6P40645 Gm5370-201ENSMUST00000187187 574 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.48□□□□□ -0.57
Sox6P40645 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox6P40645 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Sox6P40645 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Sox6P40645 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox6P40645 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox6P40645 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox6P40645 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Sox6P40645 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.48□□□□□ -0.57
Sox6P40645 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox6P40645 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms