Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Chd1P40201 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 AC166361.2-201ENSMUST00000219269 1415 ntBASIC17.88■□□□□ 0.45
Chd1P40201 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Chd1P40201 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chd1P40201 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.88■□□□□ 0.45
Chd1P40201 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Chd1P40201 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd1P40201 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC17.87■□□□□ 0.45
Chd1P40201 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.87■□□□□ 0.45
Chd1P40201 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Chd1P40201 Gm38233-201ENSMUST00000194259 807 ntBASIC17.87■□□□□ 0.45
Chd1P40201 Gm9102-201ENSMUST00000219250 465 ntBASIC17.87■□□□□ 0.45
Chd1P40201 CT030166.5-201ENSMUST00000222249 420 ntBASIC17.87■□□□□ 0.45
Chd1P40201 Id2-203ENSMUST00000222667 958 ntBASIC17.87■□□□□ 0.45
Chd1P40201 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.87■□□□□ 0.45
Chd1P40201 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC17.87■□□□□ 0.45
Chd1P40201 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC17.87■□□□□ 0.45
Chd1P40201 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd1P40201 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Gm22388-201ENSMUST00000158194 248 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chd1P40201 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC17.86■□□□□ 0.45
Chd1P40201 Gm20694-201ENSMUST00000176943 404 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Gm17944-201ENSMUST00000186351 643 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC17.86■□□□□ 0.45
Chd1P40201 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chd1P40201 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chd1P40201 Gm45643-201ENSMUST00000211364 1484 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC17.86■□□□□ 0.45
Chd1P40201 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC17.86■□□□□ 0.45
Chd1P40201 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chd1P40201 Gm11993-201ENSMUST00000121861 820 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Gm4775-201ENSMUST00000169588 402 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC17.86■□□□□ 0.45
Chd1P40201 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Chd1P40201 Gm43726-201ENSMUST00000199110 775 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Gm43811-201ENSMUST00000202862 695 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC17.86■□□□□ 0.45
Chd1P40201 Gm18001-201ENSMUST00000212023 688 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Chd1P40201 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC17.86■□□□□ 0.45
Chd1P40201 AC117769.1-201ENSMUST00000224716 1120 ntBASIC17.86■□□□□ 0.45
Chd1P40201 AC154213.1-201ENSMUST00000228234 583 ntBASIC17.86■□□□□ 0.45
Chd1P40201 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Chd1P40201 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd1P40201 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.86■□□□□ 0.45
Chd1P40201 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.85■□□□□ 0.45
Chd1P40201 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd1P40201 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chd1P40201 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chd1P40201 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chd1P40201 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC17.85■□□□□ 0.45
Chd1P40201 Gm43866-201ENSMUST00000203894 839 ntBASIC17.85■□□□□ 0.45
Chd1P40201 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chd1P40201 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd1P40201 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms