Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Lig1P37913 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Lig1P37913 Gm18711-201ENSMUST00000199341 750 ntBASIC13.92□□□□□ -0.18
Lig1P37913 Gm9555-201ENSMUST00000200908 583 ntBASIC13.92□□□□□ -0.18
Lig1P37913 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.92□□□□□ -0.18
Lig1P37913 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig1P37913 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig1P37913 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Lig1P37913 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig1P37913 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.92□□□□□ -0.18
Lig1P37913 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig1P37913 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig1P37913 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lig1P37913 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig1P37913 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lig1P37913 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig1P37913 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig1P37913 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.91□□□□□ -0.18
Lig1P37913 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Lig1P37913 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.91□□□□□ -0.18
Lig1P37913 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.91□□□□□ -0.18
Lig1P37913 Gm23251-201ENSMUST00000103773 110 ntBASIC13.91□□□□□ -0.18
Lig1P37913 Gm24891-201ENSMUST00000104391 136 ntBASIC13.91□□□□□ -0.18
Lig1P37913 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.91□□□□□ -0.18
Lig1P37913 Gm7851-201ENSMUST00000117574 323 ntBASIC13.91□□□□□ -0.18
Lig1P37913 Gm15131-201ENSMUST00000119124 595 ntBASIC13.91□□□□□ -0.18
Lig1P37913 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.91□□□□□ -0.18
Lig1P37913 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lig1P37913 Gm4157-201ENSMUST00000211647 679 ntBASIC13.91□□□□□ -0.18
Lig1P37913 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.91□□□□□ -0.18
Lig1P37913 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.91□□□□□ -0.18
Lig1P37913 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Lig1P37913 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.91□□□□□ -0.18
Lig1P37913 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.91□□□□□ -0.18
Lig1P37913 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.91□□□□□ -0.18
Lig1P37913 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig1P37913 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.91□□□□□ -0.18
Lig1P37913 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.9□□□□□ -0.18
Lig1P37913 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.9□□□□□ -0.18
Lig1P37913 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Lig1P37913 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Lig1P37913 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Gm14724-201ENSMUST00000118400 537 ntBASIC13.9□□□□□ -0.18
Lig1P37913 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.9□□□□□ -0.18
Lig1P37913 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.9□□□□□ -0.18
Lig1P37913 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.9□□□□□ -0.18
Lig1P37913 Gm6905-201ENSMUST00000205729 511 ntBASIC13.9□□□□□ -0.18
Lig1P37913 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lig1P37913 Gm45770-201ENSMUST00000212105 616 ntBASIC13.9□□□□□ -0.18
Lig1P37913 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.9□□□□□ -0.18
Lig1P37913 Gm807-202ENSMUST00000224929 408 ntBASIC13.9□□□□□ -0.18
Lig1P37913 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.9□□□□□ -0.18
Lig1P37913 Gm26035-201ENSMUST00000083065 308 ntBASIC13.9□□□□□ -0.18
Lig1P37913 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lig1P37913 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.9□□□□□ -0.18
Lig1P37913 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.9□□□□□ -0.18
Lig1P37913 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lig1P37913 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Lig1P37913 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.9□□□□□ -0.19
Lig1P37913 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Lig1P37913 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig1P37913 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig1P37913 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lig1P37913 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.89□□□□□ -0.19
Lig1P37913 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lig1P37913 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms