Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.64□□□□□ -0.87
Rom1P32958 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Rom1P32958 Gm37922-201ENSMUST00000195596 455 ntBASIC9.64□□□□□ -0.87
Rom1P32958 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.64□□□□□ -0.87
Rom1P32958 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Rom1P32958 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.64□□□□□ -0.87
Rom1P32958 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Rom1P32958 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.63□□□□□ -0.87
Rom1P32958 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.63□□□□□ -0.87
Rom1P32958 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Rom1P32958 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Gm8805-201ENSMUST00000117848 313 ntBASIC9.63□□□□□ -0.87
Rom1P32958 Gm13492-201ENSMUST00000119772 665 ntBASIC9.63□□□□□ -0.87
Rom1P32958 Gm16479-201ENSMUST00000121706 932 ntBASIC9.63□□□□□ -0.87
Rom1P32958 Gm13123-201ENSMUST00000122173 492 ntBASIC9.63□□□□□ -0.87
Rom1P32958 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Rom1P32958 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.63□□□□□ -0.87
Rom1P32958 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Rom1P32958 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.63□□□□□ -0.87
Rom1P32958 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Mir7654-201ENSMUST00000185082 70 ntBASIC9.63□□□□□ -0.87
Rom1P32958 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.63□□□□□ -0.87
Rom1P32958 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.63□□□□□ -0.87
Rom1P32958 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.63□□□□□ -0.87
Rom1P32958 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 Gm44771-201ENSMUST00000206975 626 ntBASIC9.63□□□□□ -0.87
Rom1P32958 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rom1P32958 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.63□□□□□ -0.87
Rom1P32958 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms