Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.39□□□□□ -0.27
Pde6bP23440 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.39□□□□□ -0.27
Pde6bP23440 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pde6bP23440 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pde6bP23440 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pde6bP23440 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.38□□□□□ -0.27
Pde6bP23440 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Pde6bP23440 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.38□□□□□ -0.27
Pde6bP23440 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Gm5523-201ENSMUST00000180415 997 ntBASIC13.38□□□□□ -0.27
Pde6bP23440 Gm28071-201ENSMUST00000190355 478 ntBASIC13.38□□□□□ -0.27
Pde6bP23440 AU022133-201ENSMUST00000200601 873 ntBASIC13.38□□□□□ -0.27
Pde6bP23440 Gm44100-201ENSMUST00000204329 436 ntBASIC13.38□□□□□ -0.27
Pde6bP23440 Gm9996-201ENSMUST00000070359 913 ntBASIC13.38□□□□□ -0.27
Pde6bP23440 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pde6bP23440 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Pde6bP23440 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pde6bP23440 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Pde6bP23440 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6bP23440 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pde6bP23440 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pde6bP23440 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pde6bP23440 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Gm13611-201ENSMUST00000118269 318 ntBASIC13.37□□□□□ -0.27
Pde6bP23440 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.37□□□□□ -0.27
Pde6bP23440 Gm18734-201ENSMUST00000172937 808 ntBASIC13.37□□□□□ -0.27
Pde6bP23440 Gm24514-201ENSMUST00000174961 285 ntBASIC13.37□□□□□ -0.27
Pde6bP23440 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pde6bP23440 Gm18304-201ENSMUST00000189162 546 ntBASIC13.37□□□□□ -0.27
Pde6bP23440 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pde6bP23440 Gm7848-201ENSMUST00000210739 718 ntBASIC13.37□□□□□ -0.27
Pde6bP23440 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.37□□□□□ -0.27
Pde6bP23440 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.37□□□□□ -0.27
Pde6bP23440 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.37□□□□□ -0.27
Pde6bP23440 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pde6bP23440 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6bP23440 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pde6bP23440 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pde6bP23440 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pde6bP23440 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 Gm23949-201ENSMUST00000104027 127 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms