Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.49□□□□□ -0.57
Clk1P22518 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clk1P22518 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clk1P22518 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Clk1P22518 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Clk1P22518 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clk1P22518 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clk1P22518 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clk1P22518 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clk1P22518 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clk1P22518 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.48□□□□□ -0.57
Clk1P22518 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Clk1P22518 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Mir1247-201ENSMUST00000116706 82 ntBASIC11.48□□□□□ -0.57
Clk1P22518 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.48□□□□□ -0.57
Clk1P22518 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clk1P22518 AY702102-202ENSMUST00000194651 1173 ntBASIC11.48□□□□□ -0.57
Clk1P22518 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.48□□□□□ -0.57
Clk1P22518 Gm5904-201ENSMUST00000210286 865 ntBASIC11.48□□□□□ -0.57
Clk1P22518 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.48□□□□□ -0.57
Clk1P22518 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.48□□□□□ -0.57
Clk1P22518 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.48□□□□□ -0.57
Clk1P22518 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.48□□□□□ -0.57
Clk1P22518 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Clk1P22518 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.48□□□□□ -0.57
Clk1P22518 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clk1P22518 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Clk1P22518 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.47□□□□□ -0.57
Clk1P22518 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.47□□□□□ -0.57
Clk1P22518 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Clk1P22518 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms