Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Gm29787-201ENSMUST00000222129 849 ntBASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Gm19163-201ENSMUST00000223313 780 ntBASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfrsf9P20334 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm14028-201ENSMUST00000117434 479 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm11439-201ENSMUST00000118598 409 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm15782-201ENSMUST00000121073 445 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm12566-201ENSMUST00000121479 359 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm37213-201ENSMUST00000193077 586 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm43947-201ENSMUST00000203019 959 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm30285-201ENSMUST00000214614 422 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfrsf9P20334 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms