Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.56□□□□□ -0.56
ApoeP08226 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
ApoeP08226 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.56□□□□□ -0.56
ApoeP08226 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.56□□□□□ -0.56
ApoeP08226 Gm13492-201ENSMUST00000119772 665 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Gm12036-201ENSMUST00000120008 530 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Gm9083-201ENSMUST00000120423 819 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Gm11597-201ENSMUST00000121423 964 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Gm18304-201ENSMUST00000189162 546 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Gm7287-201ENSMUST00000205267 602 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Gm6007-201ENSMUST00000208170 823 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Gm19163-201ENSMUST00000223313 780 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Gm15823-201ENSMUST00000064305 670 ntBASIC11.56□□□□□ -0.56
ApoeP08226 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
ApoeP08226 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
ApoeP08226 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.56□□□□□ -0.56
ApoeP08226 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.56□□□□□ -0.56
ApoeP08226 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ApoeP08226 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ApoeP08226 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
ApoeP08226 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.55□□□□□ -0.56
ApoeP08226 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Gm13369-201ENSMUST00000119442 987 ntBASIC11.55□□□□□ -0.56
ApoeP08226 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Gm12363-201ENSMUST00000122250 668 ntBASIC11.55□□□□□ -0.56
ApoeP08226 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Gm27701-201ENSMUST00000184498 110 ntBASIC11.55□□□□□ -0.56
ApoeP08226 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.55□□□□□ -0.56
ApoeP08226 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Gm10146-201ENSMUST00000072739 309 ntBASIC11.55□□□□□ -0.56
ApoeP08226 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
ApoeP08226 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
ApoeP08226 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.55□□□□□ -0.56
ApoeP08226 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
ApoeP08226 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ApoeP08226 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
ApoeP08226 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
ApoeP08226 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.55□□□□□ -0.56
ApoeP08226 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
ApoeP08226 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ApoeP08226 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.54□□□□□ -0.56
ApoeP08226 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ApoeP08226 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
ApoeP08226 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ApoeP08226 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.54□□□□□ -0.56
ApoeP08226 Gm12203-201ENSMUST00000118235 598 ntBASIC11.54□□□□□ -0.56
ApoeP08226 Gm11803-201ENSMUST00000119966 444 ntBASIC11.54□□□□□ -0.56
ApoeP08226 Gm12209-201ENSMUST00000120089 596 ntBASIC11.54□□□□□ -0.56
ApoeP08226 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
ApoeP08226 Gm8810-201ENSMUST00000172895 754 ntBASIC11.54□□□□□ -0.56
ApoeP08226 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms