Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TnfP06804 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TnfP06804 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.94□□□□□ -0.34
TnfP06804 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Gm23596-201ENSMUST00000104304 132 ntBASIC12.94□□□□□ -0.34
TnfP06804 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TnfP06804 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Gm11331-201ENSMUST00000119764 288 ntBASIC12.94□□□□□ -0.34
TnfP06804 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.94□□□□□ -0.34
TnfP06804 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.94□□□□□ -0.34
TnfP06804 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.94□□□□□ -0.34
TnfP06804 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.94□□□□□ -0.34
TnfP06804 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.94□□□□□ -0.34
TnfP06804 Gm43184-201ENSMUST00000197247 542 ntBASIC12.94□□□□□ -0.34
TnfP06804 Gm43378-201ENSMUST00000199336 582 ntBASIC12.94□□□□□ -0.34
TnfP06804 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TnfP06804 Gm4157-201ENSMUST00000211647 679 ntBASIC12.94□□□□□ -0.34
TnfP06804 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.94□□□□□ -0.34
TnfP06804 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TnfP06804 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TnfP06804 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TnfP06804 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TnfP06804 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.94□□□□□ -0.34
TnfP06804 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TnfP06804 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.93□□□□□ -0.34
TnfP06804 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TnfP06804 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TnfP06804 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.93□□□□□ -0.34
TnfP06804 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.93□□□□□ -0.34
TnfP06804 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.93□□□□□ -0.34
TnfP06804 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.93□□□□□ -0.34
TnfP06804 Gm3786-201ENSMUST00000202659 378 ntBASIC12.93□□□□□ -0.34
TnfP06804 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.93□□□□□ -0.34
TnfP06804 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.93□□□□□ -0.34
TnfP06804 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
TnfP06804 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.93□□□□□ -0.34
TnfP06804 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Gm21811-201ENSMUST00000096485 930 ntBASIC12.93□□□□□ -0.34
TnfP06804 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.93□□□□□ -0.34
TnfP06804 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TnfP06804 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.93□□□□□ -0.34
TnfP06804 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TnfP06804 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TnfP06804 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.92□□□□□ -0.34
TnfP06804 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.92□□□□□ -0.34
TnfP06804 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TnfP06804 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TnfP06804 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.92□□□□□ -0.34
TnfP06804 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.92□□□□□ -0.34
TnfP06804 Gm23699-201ENSMUST00000158835 135 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm20426-201ENSMUST00000173657 440 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Gm8343-201ENSMUST00000182705 994 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.92□□□□□ -0.34
TnfP06804 Gm3332-201ENSMUST00000189337 928 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
TnfP06804 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms