Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.19□□□□□ -0.78
CfdP03953 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
CfdP03953 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CfdP03953 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.19□□□□□ -0.78
CfdP03953 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
CfdP03953 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
CfdP03953 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CfdP03953 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.19□□□□□ -0.78
CfdP03953 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Mir8102-201ENSMUST00000184148 139 ntBASIC10.19□□□□□ -0.78
CfdP03953 Gm2495-201ENSMUST00000191160 466 ntBASIC10.19□□□□□ -0.78
CfdP03953 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.19□□□□□ -0.78
CfdP03953 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.19□□□□□ -0.78
CfdP03953 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Gm24526-201ENSMUST00000082921 158 ntBASIC10.19□□□□□ -0.78
CfdP03953 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.19□□□□□ -0.78
CfdP03953 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.19□□□□□ -0.78
CfdP03953 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CfdP03953 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.19□□□□□ -0.78
CfdP03953 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CfdP03953 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CfdP03953 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CfdP03953 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.18□□□□□ -0.78
CfdP03953 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.18□□□□□ -0.78
CfdP03953 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CfdP03953 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CfdP03953 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.18□□□□□ -0.78
CfdP03953 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CfdP03953 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
CfdP03953 Gm11597-201ENSMUST00000121423 964 ntBASIC10.18□□□□□ -0.78
CfdP03953 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CfdP03953 Gm26185-201ENSMUST00000157692 266 ntBASIC10.18□□□□□ -0.78
CfdP03953 Gm6736-201ENSMUST00000166583 948 ntBASIC10.18□□□□□ -0.78
CfdP03953 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.18□□□□□ -0.78
CfdP03953 Gm18304-201ENSMUST00000189162 546 ntBASIC10.18□□□□□ -0.78
CfdP03953 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.18□□□□□ -0.78
CfdP03953 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.18□□□□□ -0.78
CfdP03953 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CfdP03953 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.18□□□□□ -0.78
CfdP03953 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.18□□□□□ -0.78
CfdP03953 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.18□□□□□ -0.78
CfdP03953 Gm8598-201ENSMUST00000221184 836 ntBASIC10.18□□□□□ -0.78
CfdP03953 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.18□□□□□ -0.78
CfdP03953 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.18□□□□□ -0.78
CfdP03953 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CfdP03953 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CfdP03953 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
CfdP03953 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
CfdP03953 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.18□□□□□ -0.78
CfdP03953 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
CfdP03953 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms