Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.27□□□□□ -0.6
Cops4O88544 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cops4O88544 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cops4O88544 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cops4O88544 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cops4O88544 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cops4O88544 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cops4O88544 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cops4O88544 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.27□□□□□ -0.61
Cops4O88544 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cops4O88544 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cops4O88544 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.27□□□□□ -0.61
Cops4O88544 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Gm24231-201ENSMUST00000104315 133 ntBASIC11.27□□□□□ -0.61
Cops4O88544 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cops4O88544 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.27□□□□□ -0.61
Cops4O88544 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Gm23363-201ENSMUST00000175024 79 ntBASIC11.27□□□□□ -0.61
Cops4O88544 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.27□□□□□ -0.61
Cops4O88544 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.27□□□□□ -0.61
Cops4O88544 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.27□□□□□ -0.61
Cops4O88544 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.27□□□□□ -0.61
Cops4O88544 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.27□□□□□ -0.61
Cops4O88544 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.27□□□□□ -0.61
Cops4O88544 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.27□□□□□ -0.61
Cops4O88544 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.27□□□□□ -0.61
Cops4O88544 Gm7287-201ENSMUST00000205267 602 ntBASIC11.27□□□□□ -0.61
Cops4O88544 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.27□□□□□ -0.61
Cops4O88544 Gm45384-201ENSMUST00000210451 277 ntBASIC11.27□□□□□ -0.61
Cops4O88544 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.27□□□□□ -0.61
Cops4O88544 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cops4O88544 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cops4O88544 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cops4O88544 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cops4O88544 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.26□□□□□ -0.61
Cops4O88544 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cops4O88544 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Cops4O88544 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cops4O88544 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.26□□□□□ -0.61
Cops4O88544 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.26□□□□□ -0.61
Cops4O88544 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.26□□□□□ -0.61
Cops4O88544 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.26□□□□□ -0.61
Cops4O88544 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.26□□□□□ -0.61
Cops4O88544 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Cops4O88544 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.26□□□□□ -0.61
Cops4O88544 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cops4O88544 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.26□□□□□ -0.61
Cops4O88544 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cops4O88544 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Cops4O88544 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Cops4O88544 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.26□□□□□ -0.61
Cops4O88544 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.26□□□□□ -0.61
Cops4O88544 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.26□□□□□ -0.61
Cops4O88544 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.26□□□□□ -0.61
Cops4O88544 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cops4O88544 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cops4O88544 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms