Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Gm8459-201ENSMUST00000162504 760 ntBASIC11.48□□□□□ -0.57
Colca2F8VPY8 Gm10807-201ENSMUST00000177134 795 ntBASIC11.48□□□□□ -0.57
Colca2F8VPY8 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.48□□□□□ -0.57
Colca2F8VPY8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Gm45500-201ENSMUST00000211676 803 ntBASIC11.48□□□□□ -0.57
Colca2F8VPY8 Gm18514-201ENSMUST00000218980 436 ntBASIC11.48□□□□□ -0.57
Colca2F8VPY8 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.48□□□□□ -0.57
Colca2F8VPY8 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.48□□□□□ -0.57
Colca2F8VPY8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Colca2F8VPY8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm12218-201ENSMUST00000117666 399 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm11244-201ENSMUST00000121243 237 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm11354-201ENSMUST00000121974 422 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm22146-201ENSMUST00000157397 288 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm8451-201ENSMUST00000170338 447 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm26989-201ENSMUST00000182608 749 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm44487-201ENSMUST00000205145 325 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm7536-201ENSMUST00000077389 444 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Gm5453-201ENSMUST00000080866 447 ntBASIC11.47□□□□□ -0.57
Colca2F8VPY8 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Colca2F8VPY8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms