Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm3543D3Z235 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.1□□□□□ -0.63
Gm3543D3Z235 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm11531-201ENSMUST00000117614 555 ntBASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.1□□□□□ -0.63
Gm3543D3Z235 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm15547-201ENSMUST00000122152 333 ntBASIC11.1□□□□□ -0.63
Gm3543D3Z235 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.1□□□□□ -0.63
Gm3543D3Z235 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm3543D3Z235 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.09□□□□□ -0.63
Gm3543D3Z235 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.09□□□□□ -0.63
Gm3543D3Z235 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm3543D3Z235 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms