Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb2S4R1M3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.81■□□□□ 0.92
H2afb2S4R1M3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
H2afb2S4R1M3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb2S4R1M3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb2S4R1M3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.81■□□□□ 0.92
H2afb2S4R1M3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
H2afb2S4R1M3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
H2afb2S4R1M3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
H2afb2S4R1M3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afb2S4R1M3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
H2afb2S4R1M3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afb2S4R1M3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H2afb2S4R1M3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H2afb2S4R1M3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.79■□□□□ 0.92
H2afb2S4R1M3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
H2afb2S4R1M3 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.79■□□□□ 0.92
H2afb2S4R1M3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afb2S4R1M3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afb2S4R1M3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb2S4R1M3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb2S4R1M3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb2S4R1M3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
H2afb2S4R1M3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb2S4R1M3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb2S4R1M3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb2S4R1M3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afb2S4R1M3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afb2S4R1M3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afb2S4R1M3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
H2afb2S4R1M3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
H2afb2S4R1M3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.76■□□□□ 0.91
H2afb2S4R1M3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb2S4R1M3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb2S4R1M3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb2S4R1M3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb2S4R1M3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb2S4R1M3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
H2afb2S4R1M3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.75■□□□□ 0.91
H2afb2S4R1M3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.75■□□□□ 0.91
H2afb2S4R1M3 Gm10232-201ENSMUST00000089221 720 ntBASIC20.75■□□□□ 0.91
H2afb2S4R1M3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb2S4R1M3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb2S4R1M3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.73■□□□□ 0.91
H2afb2S4R1M3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb2S4R1M3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.73■□□□□ 0.91
H2afb2S4R1M3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.73■□□□□ 0.91
H2afb2S4R1M3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
H2afb2S4R1M3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb2S4R1M3 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.73■□□□□ 0.91
H2afb2S4R1M3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H2afb2S4R1M3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
H2afb2S4R1M3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H2afb2S4R1M3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
H2afb2S4R1M3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
H2afb2S4R1M3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H2afb2S4R1M3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H2afb2S4R1M3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H2afb2S4R1M3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
H2afb2S4R1M3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb2S4R1M3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
H2afb2S4R1M3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb2S4R1M3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb2S4R1M3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb2S4R1M3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb2S4R1M3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb2S4R1M3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb2S4R1M3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms