Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Odf4Q8VI88 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Odf4Q8VI88 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Odf4Q8VI88 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Odf4Q8VI88 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.4■□□□□ 0.54
Odf4Q8VI88 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.4■□□□□ 0.54
Odf4Q8VI88 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Odf4Q8VI88 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Odf4Q8VI88 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.39■□□□□ 0.53
Odf4Q8VI88 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Odf4Q8VI88 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Odf4Q8VI88 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Odf4Q8VI88 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Odf4Q8VI88 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Odf4Q8VI88 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Odf4Q8VI88 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Odf4Q8VI88 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Odf4Q8VI88 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Odf4Q8VI88 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Odf4Q8VI88 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Odf4Q8VI88 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Odf4Q8VI88 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Odf4Q8VI88 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.37■□□□□ 0.53
Odf4Q8VI88 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Odf4Q8VI88 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.36■□□□□ 0.53
Odf4Q8VI88 Etf1-202ENSMUST00000180351 108 ntBASIC18.36■□□□□ 0.53
Odf4Q8VI88 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Odf4Q8VI88 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Odf4Q8VI88 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Odf4Q8VI88 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Odf4Q8VI88 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Odf4Q8VI88 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Odf4Q8VI88 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.35■□□□□ 0.53
Odf4Q8VI88 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Odf4Q8VI88 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.35■□□□□ 0.53
Odf4Q8VI88 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Odf4Q8VI88 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Odf4Q8VI88 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Odf4Q8VI88 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Odf4Q8VI88 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Odf4Q8VI88 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Odf4Q8VI88 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Odf4Q8VI88 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Odf4Q8VI88 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Odf4Q8VI88 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Odf4Q8VI88 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Odf4Q8VI88 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Odf4Q8VI88 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Odf4Q8VI88 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Odf4Q8VI88 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Odf4Q8VI88 Gm15039-201ENSMUST00000118914 875 ntBASIC18.33■□□□□ 0.52
Odf4Q8VI88 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Odf4Q8VI88 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Odf4Q8VI88 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Odf4Q8VI88 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Odf4Q8VI88 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Odf4Q8VI88 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.32■□□□□ 0.52
Odf4Q8VI88 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Odf4Q8VI88 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Odf4Q8VI88 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Odf4Q8VI88 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Odf4Q8VI88 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Odf4Q8VI88 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Odf4Q8VI88 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Odf4Q8VI88 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.3■□□□□ 0.52
Odf4Q8VI88 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Odf4Q8VI88 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms