Protein–RNA interactions for Protein: Q8C7R2

Gm3411, Predicted gene 3411, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3411Q8C7R2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Gm3411Q8C7R2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3411Q8C7R2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3411Q8C7R2 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.66■□□□□ 0.9
Gm3411Q8C7R2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3411Q8C7R2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3411Q8C7R2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3411Q8C7R2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gm3411Q8C7R2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3411Q8C7R2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.65■□□□□ 0.9
Gm3411Q8C7R2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3411Q8C7R2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3411Q8C7R2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3411Q8C7R2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3411Q8C7R2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3411Q8C7R2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3411Q8C7R2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3411Q8C7R2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Gm3411Q8C7R2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.64■□□□□ 0.9
Gm3411Q8C7R2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3411Q8C7R2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3411Q8C7R2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.64■□□□□ 0.89
Gm3411Q8C7R2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3411Q8C7R2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.64■□□□□ 0.89
Gm3411Q8C7R2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3411Q8C7R2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3411Q8C7R2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3411Q8C7R2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3411Q8C7R2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3411Q8C7R2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3411Q8C7R2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gm3411Q8C7R2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
Gm3411Q8C7R2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3411Q8C7R2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gm3411Q8C7R2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3411Q8C7R2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm3411Q8C7R2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3411Q8C7R2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3411Q8C7R2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.62■□□□□ 0.89
Gm3411Q8C7R2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3411Q8C7R2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3411Q8C7R2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3411Q8C7R2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gm3411Q8C7R2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Gm3411Q8C7R2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.61■□□□□ 0.89
Gm3411Q8C7R2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.61■□□□□ 0.89
Gm3411Q8C7R2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3411Q8C7R2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3411Q8C7R2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gm3411Q8C7R2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3411Q8C7R2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3411Q8C7R2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3411Q8C7R2 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.6■□□□□ 0.89
Gm3411Q8C7R2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Gm3411Q8C7R2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3411Q8C7R2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3411Q8C7R2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3411Q8C7R2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Gm3411Q8C7R2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gm3411Q8C7R2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3411Q8C7R2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3411Q8C7R2 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.58■□□□□ 0.89
Gm3411Q8C7R2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.58■□□□□ 0.88
Gm3411Q8C7R2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3411Q8C7R2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3411Q8C7R2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3411Q8C7R2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.57■□□□□ 0.88
Gm3411Q8C7R2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3411Q8C7R2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3411Q8C7R2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3411Q8C7R2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3411Q8C7R2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3411Q8C7R2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Gm3411Q8C7R2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3411Q8C7R2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms