Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd9Q8BYH8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Chd9Q8BYH8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chd9Q8BYH8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd9Q8BYH8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd9Q8BYH8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chd9Q8BYH8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Chd9Q8BYH8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd9Q8BYH8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.7■□□□□ 0.26
Chd9Q8BYH8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd9Q8BYH8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chd9Q8BYH8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.7■□□□□ 0.26
Chd9Q8BYH8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Mir6982-201ENSMUST00000184354 68 ntBASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd9Q8BYH8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chd9Q8BYH8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd9Q8BYH8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.67■□□□□ 0.26
Chd9Q8BYH8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd9Q8BYH8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.67■□□□□ 0.26
Chd9Q8BYH8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd9Q8BYH8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.67■□□□□ 0.26
Chd9Q8BYH8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd9Q8BYH8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd9Q8BYH8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd9Q8BYH8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Chd9Q8BYH8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd9Q8BYH8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd9Q8BYH8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd9Q8BYH8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd9Q8BYH8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.66■□□□□ 0.26
Chd9Q8BYH8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.66■□□□□ 0.26
Chd9Q8BYH8 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.65■□□□□ 0.26
Chd9Q8BYH8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chd9Q8BYH8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd9Q8BYH8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd9Q8BYH8 Gm43060-201ENSMUST00000200621 289 ntBASIC16.65■□□□□ 0.26
Chd9Q8BYH8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.65■□□□□ 0.26
Chd9Q8BYH8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd9Q8BYH8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd9Q8BYH8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd9Q8BYH8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chd9Q8BYH8 Gm12251-201ENSMUST00000117893 792 ntBASIC16.64■□□□□ 0.25
Chd9Q8BYH8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd9Q8BYH8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd9Q8BYH8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Chd9Q8BYH8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd9Q8BYH8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Chd9Q8BYH8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd9Q8BYH8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.64■□□□□ 0.25
Chd9Q8BYH8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd9Q8BYH8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.64■□□□□ 0.25
Chd9Q8BYH8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.63■□□□□ 0.25
Chd9Q8BYH8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.63■□□□□ 0.25
Chd9Q8BYH8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Gm8520-201ENSMUST00000186517 868 ntBASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Chd9Q8BYH8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd9Q8BYH8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd9Q8BYH8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd9Q8BYH8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chd9Q8BYH8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms